Symbiotic Fungi: Principles and Practice

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Abstract The mycorrhizal symbiosis between soil fungi and plant roots is a ubiquitous mutualism that plays key roles in plant nutrition, soil health, and carbon cycling. Keywords: mycorrhizae, Laccaria , Tuber , Rhizophagus , Glomus. Open in a separate window. Table 1 Properties of the first sequenced mycorrhizal fungal genomes.

Species Laccaria bicolor Tuber melanosporum Rhizophagus irregularis Phylogeny Basidiomycota, Agaricales Ascomycota, Pezizales Glomeromycota, Glomerales Mycorrhizal morphotype Ectomycorrhiza Ectomycorrhiza Arbuscular mycorrhiza Plant partners Broad range of forest trees, hardwoods and conifers, such as poplars and firs Narrow range of forest trees, hardwoods and conifers, such as hazel tree and oaks Hundreds of herbaceous plant species, including crops such as wheat and rice Genomic assembly Mbp Conflict of Interest Statement The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

SOD1-targeted gene disruption in the ericoid mycorrhizal fungus Oidiodendron maius reduces conidiation and the capacity for mycorrhization. Plant Microbe Interact. Plant sesquiterpenes induce hyphal branching in arbuscular mycorrhizal fungi. Nature — Hyphal and cytoskeleton polarization in Tuber melanosporum : a genomic and cellular analysis. Fungal Genet. Genome-wide analysis of cell wall-related genes in Tuber melanosporum. Genome-wide inventory of metal homeostasis-related gene products including a functional phytochelatin synthase in the hypogeous mycorrhizal fungus Tuber melanosporum.

Genomic profiling of carbohydrate metabolism in the ectomycorrhizal fungus Tuber melanosporum.

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New Phytol. Phylogenetic analysis, genomic organization, and expression analysis of multi-copper oxidases in the ectomycorrhizal basidiomycete Laccaria bicolor. Hock B. Berlin: Springer; , — The major pathways of carbohydrate metabolism in the ectomycorrhizal basidiomycete Laccaria bicolor SN.

The aquaporin gene family of the ectomycorrhizal fungus Laccaria bicolor : lessons for symbiotic functions. Transcript patterns associated with ectomycorrhiza development in Eucalyptus globulus and Pisolithus microcarpus. The ectomycorrhizal fungus Laccaria bicolor stimulates lateral root formation in poplar and Arabidopsis through auxin transport and signaling.

Plant Physiol. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science — Laser microdissection and microarray analysis of Tuber melanosporum ectomycorrhizas reveal functional heterogeneity between mantle and Hartig net compartments.

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Mating type gene homologues and putative sex pheromone-sensing pathway in arbuscular mycorrhizal fungi, a presumably asexual plant root symbiont. Cellular mechanisms for heavy metal detoxification and tolerance. T-DNA transfer and integration in the ectomycorrhizal fungus Suillus bovinus using hygromycin B as a selectable marker. Expression of the fluorescence markers DsRed and GFP fused to a nuclear localization signal in the arbuscular mycorrhizal fungus Glomus intraradices.

A versatile monosaccharide transporter that operates in the arbuscular mycorrhizal fungus Glomus sp. Plant Cell 23 — Fungal Biol. Proteome Res. Transcriptional responses of Paxillus involutus and Betula pendula during formation of ectomycorrhizal root tissue. Agrobacterium -mediated transformation of the ectomycorrhizal symbiont Laccaria bicolor SN. Mycorrhiza 16 19—22 RNA silencing in the model mycorrhizal fungus Laccaria bicolor : gene knock-down of nitrate reductase results in inhibition of symbiosis with Populus. LbNrt RNA silencing in the mycorrhizal symbiont Laccaria bicolor reveals a nitrate-independent regulatory role for a eukaryotic NRT2-type nitrate transporter.

Cloning and characterization of a symbiosis-related gene from an ectomycorrhizal fungus Laccaria bicolor. Gene — A secreted fungal effector of Glomus intraradices promotes symbiotic biotrophy. Survey and analysis of simple sequence repeats in the Laccaria bicolor genome, with development of microsatellite markers. Characterization of transposable elements in the ectomycorrhizal fungus Laccaria bicolor. Rutin, the phenolglycoside from Eucalyptus root exudates, stimulates Pisolithus hyphal growth at picomolar concentrations.

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Genetic and genomic glimpses of the elusive arbuscular mycorrhizal fungi. Plant Biol. Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome. BMC Syst.

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Using deep RNA sequencing for the structural annotation of the Laccaria bicolor mycorrhizal transcriptome. Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus. PLoS Genet. The sugar porter gene family of Laccaria bicolor : function in ectomycorrhizal symbiosis and soil-growing hyphae. A gene repertoire for nitrogen transporters in Laccaria bicolor. Fungal lipochitooligosaccharide symbiotic signals in arbuscular mycorrhiza. Nature 58—63 Genetic transformation of the symbiotic basidiomycete fungus Hebeloma cylindrosporum.

The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Nature 88—92 Harnessing ectomycorrhizal genomics for ecological insights. The Laccaria genome: a symbiont blueprint decoded.

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  8. Imaging mycorrhizal fungal transformants that express EGFP during ericoid endosymbiosis. Genome-wide search and functional identification of transcription factors in the mycorrhizal fungus Tuber melanosporum. Comparison of the thiol-dependent antioxidant systems in the ectomycorrhizal Laccaria bicolor and the saprotrophic Phanerochaete chrysosporium.

    The expression of a symbiosis-regulated gene in eucalypt roots is regulated by auxins and hypaphorine, the tryptophan betaine of the ectomycorrhizal basidiomycete Pisolithus tinctorius. Planta — Gene organization of the mating type regions in the ectomycorrhizal fungus Laccaria bicolor reveals distinct evolution between the two mating type loci.

    Put another way, those apple trees of mine proved to be the very best teachers. Plants and fungi become that much more resilient by looking out for the other. The resulting phytochemical cascade in turn serves both the farmer and the herbalist. Worlds merged yet again as fascination led the way.

    Are you getting a feel for how this works? Thinking fungally, exploring fungally, intuiting fungally.

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    Trusting that journey makes it possible for me to share practical teachings about mycorrhizal fungi and real-time plant health. The two are intimately linked in ways that make a holistic approach all the more spot-on. I always liked what Liberty Hyde Bailey of Cornell had to say, slightly paraphrased: If a grower knows why, he or she will teach themselves how.

    Every growing season is a renewed opportunity to let the green world astound. Knowing about species adaptability, propagules, and nutrient transfer mechanisms makes us better earth stewards, frankly. All starts to click as growers recognize why investing in health is far preferable to dealing with the myriad of problems that arise as a result of mistreating soil life.

    I double dog dare ya to embrace holistic means in growing food for your family and community. Working with resistance metabolites and fungal allies beats toxic thinking hands down. The language of trade helps in understanding how deals get done. Profound intelligence exists in natural systems, so prepare to be awed.

    And then prepare to not disturb the impeccable! Soil aggregates are the direct result of respecting the primary role of fungi in what might best be thought of as biologically induced alchemy. Thinking fungally puts the right framework on how to garden, design landscapes, and grow tree fruit. Fostering fungal precepts makes for more resilient forests and farms. Finding the edible among mycorrhizal mushrooms in the wild is a passion unto itself. Transformation happens when we take the initiative to do better by soils everywhere.

    The fungi will take it from there. Having a picture-perfect farm may be aesthetically pleasing, however, those farms are most likely lacking in biodiversity—an essential part for an operating farm. Scaling back on some farm maintenance like mowing or clearing out ditches allows the land to return to its natural wild state. This provides more room for fruit-bearing plants to grow and…. For ten years Alice Percy operated a commercial hog operation on her farm in Whitefield, Maine, becoming the largest certified hog producer in the state. She has presented workshops….

    There are many different varieties of kimchi that can satisfy any craving from breakfast foods to meats. This tangy and spicy meal works well with all kinds of vegetables, and yes, even fruit. Add apples for an unusual—but delicious—twist on a classic Korean dish. The following is an excerpt from Black Trumpet by Evan Mallett.

    Root cellars are a great way to keep your harvest fresh through the cold months. With protection from weather and animals, a root cellar can be just as good as a regular refrigerator. These cellars can be built into a wall in your basement, dug into the ground, or simply buried. The following excerpt is…. Years ago family farms were an abundance. Generations of farmers passed the land down in hopes of it continuing to prosper.

    Symbiotic Fungi: Principles and Practice by Ajit Varma, Amit C. Kharkwal -

    However, these farms are a rarity; smaller ones are put out of business by large corporations and the cost of maintenance yields no profit. Evolutionary history of the symbiosis between fungus-growing ants and their fungi. Science The foraging behavior of Atta cephalotes L. Hymenoptera, Formicidae 1. Foraging pattern and plant species attacked in tropical rain forest. Animal Ecol. A review of the status of leaf-cutting ants and their control. The mutualism between leaf-cutting ants and their fungus, p. Wilding, N. Collins, P. Weber eds.

    Academic Press, San Diego, p. Leucoagaricus basidiomata from a live nest of the leaf-cutting ant Atta cephalotes. Forti, V. Economics of grass-cutting ants, p. Vandermeer eds. Biology and management. Westview Press, Bolder, Colorado and London, p. The biochemical basis for the symbiosis between the ant, Atta colombica tonsipes , and its food fungus. Silva, M. Hebling-Beraldo, O. Bueno, J.

    Symbiotic Fungi: Principles and Practice (Soil Biology)

    Toxicity of sesame extracts to the symbiotic fungus of leaf-cutting ants. The role of the fungus in the diet of the leaf-cutting ant Atta cephalotes L. Bacci, Jr. Pagnocca, O. Metabolism of plant polysaccharides by Leucoagariccus gongylophorus , the symbiotic fungus of the ant Atta sexdens L. Buffers: Principles and practice, p. Deutscher ed. Pasadena Academic Press, Pasadena, v. Leaf damage in tropical rain forest canopies.

    Sutton, T. Chadwick eds.

    Fungi Symbiotic Relationship With Plants

    Bioestatistical analysis, 3 rd ed. admin