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Microbial Ecology of Foods V2 - 1st Edition
Lozupone, D. McDonald, B. Muegge, M. Pirrung, J. Reeder, J. Sevinsky, P. Turnbaugh, W. Walters, J.
Streams of data from drops of water: 21st century molecular microbial ecology
Widmann, T. Yatsunenko, J. Zaneveld, R. Shyu, T. Soule, S. Bent, J. Foster, L. Collins, G. Rocap: Nucl. Acids Res, Vol. Smith, B. Danilowicz, A. Clear, F. Costello, B. Wilson, W. Kent, D. Benson, E. Culman, R.
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Lozupone, M. As a result, a more holistic understanding of freshwater habitats is emerging, alongside the critical roles microorganisms fulfill within them. Currently, developments in molecular microbial ecology are being utilized across the wider ecological research community; refining biomonitoring, redefining food webs, and examining ecological networks that would have previously omitted microbial taxa. The continued increase in multiple stressors acting on freshwaters ecosystems leads to growing challenges in environmental management, but with the latest generation of molecular tools at our disposal, the role microbial communities play in meeting and understanding these challenges will never be overlooked again.
We are grateful to various funding sources. Impacts and indicators of change in lotic ecosystems. Volume 5 , Issue 4. The full text of this article hosted at iucr. If you do not receive an email within 10 minutes, your email address may not be registered, and you may need to create a new Wiley Online Library account. If the address matches an existing account you will receive an email with instructions to retrieve your username.
Clark Corresponding Author E-mail address: dclarkb essex. Search for more papers by this author. Robert M. Danielle N. Kirsty J. Hannah J. Kate C. Scott L. Dumbrell Corresponding Author E-mail address: adumbrell essex.
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Please review our Terms and Conditions of Use and check box below to share full-text version of article. Abstract Microorganisms are ubiquitous and represent a taxonomically and functionally diverse component of freshwater environments of significant ecological importance. Figure 1 Open in figure viewer PowerPoint. Whether the study is observational, experimental, or routine biomonitoring, all approaches require the extraction and purification of biological molecules, such as DNA or RNA from the environment.
Approaches on the left require amplification of specific genes via PCR, whereas approaches on the right do not require a target, and are conducted on the entire pool of nucleic acids. Figure 2 Open in figure viewer PowerPoint. They discovered four distinct phylogenetic clades of anammox bacteria that differed markedly in relative abundance across the different riverbed geologies. Notably, they found that phosphate uptake genes were differentially expressed according to the source of phosphate, and time of day.
Abarenkov, K. New Phytologist , 2 , — Google Scholar. Crossref Google Scholar.
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